Import all data — import_all_data • mums2

This function is a wrapper for the mpactr import_data function. It will import your peak table and meta data and create a mpactr_object.

Usage

import_all_data(peak_table, metadata, format)

Arguments

peak_table: The file path to your feature table file.
metadata: The file path to your metadata file or data.frame.
format: The expected exported type of your peak table, can be one of "Progenesis", "Metaboscape", "None".

Value

a mpactr object.

Examples

data <-
   import_all_data(peak_table =
                   mums2::mums2_example("botryllus_pt_small.csv"),
                   metadata =
                   mums2::mums2_example("boryillus_metadata.csv"),
                   format = "None")